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Coastal Research Projects:
- Bioaccumulation of mercury in large coastal fishes
- Early life ecology of red snapper on inshore banks
- Ecology of fishes associated with Sargassum mats
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Mercury project
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Collecting pelagic fishes for
Hg study |
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Snapper ecology project
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Trawling for newly settled red
snapper |

Newly settled red snapper |
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Sargassum ecology project
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Sampling Sargassum with larval purse
seine |

Sargassum fluitans and S. natans |

Juvenile amberjack |
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1. Bioaccumulation of mercury in large coastal fishes |
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We are currently in the process of evaluating the mercury
(Hg) concentration in the tissue of pelagic fishes from the NW Gulf of
Mexico, examining spatial variation in concentration of Hg in the tissue
of pelagic fishes and developing predictive models relating fish size
and feeding histories (based on natural dietary markers-fatty acids) to
Hg profile in pelagic fishes. Current work centers on relating patterns
of movement and site fidelity (pop-up satellite tags) to fish tissue Hg,
and developing a predictive model to evaluate risk factors associated
with consumption of pelagic fishes with varying levels of fish tissue
Hg.
Recently, mercury (Hg) concentration was determined in the tissues of ten
pelagic fishes, with a special emphasis on apex predators (Table 1).
Highest Hg levels were observed in blue marlin, carcharhinid sharks
(Genus Carcharhinus) and little tunny, ranging from ~1.0 to 10.5
ppm. Moderate to low concentrations (<1.0 ppm) were observed in blackfin
tuna, cobia, dolphin, greater amberjack, king mackerel, wahoo, and
yellowfin tuna. For the majority of species examined, Hg concentrations
did not vary significantly between location (Texas vs. Louisiana) or
collection period. Relationship between Hg concentration and fish
size/weight were also explored for six taxa (blackfin tuna, carcharhinid
sharks, dolphin, king mackerel, wahoo, yellowfin tuna), with each
showing a significant positive relationships between Hg concentration
and body size and/or weight. Natural dietary tracers, stable isotopes
(δ15N, δ13C) and fatty acids, were used to evaluate the relationship
between Hg and trophic position and the relationship between Hg and
dietary history. Stable nitrogen isotope analysis showed that Hg
concentrations in fish tissues were positively associated with trophic
position. Based on the δ13C and δ15N values of pelagic fishes, three
natural associations were identified and groupings were identical to
those detected with fatty acid signatures. No connection between the
three natural trophic associations and Hg was observed, and thus the
bioaccumulation of Hg in these pelagic taxa was not related directly to
prey selection patterns.
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Table 1. Hg level of ten taxa of pelagic
fishes from the NW Gulf of Mexico. |
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Common name |
N |
[Hg] total ppm wet weight |
Total length (cm) |
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mean |
range |
mean |
range |
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blackfin tuna* |
48 |
0.64 |
0.00 - 1.41 |
73 |
22 - 87 |
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blue marlin** |
9 |
10.52 |
4.95 - 18.72 |
285 |
256 - 311 |
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carcharhinid sharks** |
9 |
1.61 |
0.46 - 4.08 |
69 |
15 - 96 |
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cobia* |
17 |
0.89 |
0.20 - 2.40 |
97 |
76 - 142 |
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dolphin |
57 |
0.07 |
0.01 - 0.49 |
79 |
38 - 135 |
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greater amberjack* |
44 |
0.60 |
0.24 - 1.07 |
84 |
689 - 112 |
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king mackerel* |
39 |
0.96 |
0.37 - 1.46 |
84 |
64 - 104 |
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little tunny** |
9 |
1.08 |
0.24 - 2.52 |
56 |
52 - 66 |
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wahoo* |
52 |
0.78 |
0.01 - 3.31 |
133 |
103 - 175 |
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yellowfin tuna |
103 |
0.18 |
0.07 - 0.87 |
112 |
54 - 159 |
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N = Number of
individuals.
** > FDA 2001 recommended criteria level (1.0 μg/g wet wt.).
* > EPA 2002 recommended criteria level (0.3 μg/g wet wt.). |
Further Reading
Cai Y , Rooker JR, Gill G, Turner JP (2007) Bioaccumulation of mercury in pelagic fishes from
the Gulf of Mexico: evaluating links to dietary history and trophic position using stable
isotopes and fatty acids. Canadian Journal of Fisheries and Aquatic Sciences 64: 458-469
Cai Y, Rooker JR, Gill G (2006) Bioaccumulation of mercury in pelagic fishes in the NW Gulf
of Mexico and its relationship with location, length, collection year and trophic level.
Proceeding of the Gulf and Caribbean Fisheries Institute 57: 317-326
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2. Early life ecology of red snapper on inshore banks |
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The aim of our research on red snapper (Lutjanus
campechanus) was to determine patterns of habitat use by newly
settled individuals, and assess the quality of different banks and
habitats used during early life. Trawl surveys were conducted to measure
patterns of habitat use by newly settled red snapper (Lutjanus
campechanus) at three natural banks on the inner continental shelf of
Texas. Digital side-scan sonar and multibeam bathymetric data were used
to define inshore (mud), ridge (shell), and offshore (mud) habitats for
Freeport Rocks, Heald Bank, and Sabine Bank. Otter trawls were conducted
July through September in 2003 (Heald Bank, Sabine Bank) and in 2004
(Freeport Rocks) during the settlement period for red snapper. Freeport
Rocks had markedly higher densities of red snapper (91 ha−1) in 2004
than Heald Bank (6 ha−1) or Sabine Bank (<1 ha−1) in 2003. A significant
habitat effect was observed at Heald Bank and densities were higher at
offshore mud habitats; no habitat effect was detected for Freeport Rocks
or Sabine Bank. Growth rates varied from 0.86 mm⋅d−1 at Sabine Bank up
to 1.12 mm⋅d−1 at Freeport Rocks, and rates were higher on inshore and
offshore mud than ridge habitats. Otolith based estimates of age
indicated that settlers were first detected at 2228 d and the majority
of individuals were 3060 d. Hatch dates peaked from early June to early
July in both 2003 and 2004. Results from this study indicate that both
shell and inshore and offshore mud habitats associated with these
natural banks serve as settlement habitat of red snapper, and all three
habitats have the potential to function as nursery areas of this
species.

click graphic to enlarge
Density of newly settled red snapper on Freeport rocks, red indicates high density.
Plots from top left (clockwise) early July, late July, early August, and late August.
Further Reading
Geary BW , Mikulas JJ , Rooker JR, Landry AM (2007). Patterns of habitat use by newly settled red snapper in the northwestern Gulf of Mexico.
Pages 37 - 53 In W. F. Patterson et al. eds. Red Snapper Ecology and Fisheries in the U.S. Gulf of Mexico. American Fisheries Society,
Symposium 60, Bethesda, Maryland.
Rooker JR, Landry AM, Geary BW, Harper JA (2004) Assessment of a bathymetric high and associated habitats as nursery grounds of postsettlement red
snapper. Estuarine, Coastal and Shelf Science 59: 653-661
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3. Ecology of fishes associated with Sargassum mats |
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A broad goal of oceanographers and marine ecologists has been
to understand trophic relationships in shelf and open ocean communities.
To date, considerable work has focused upon characterizing benthic
ecosystems, and these efforts have led to valuable information on energy
flow and food web structure. Unfortunately, information on the structure
and dynamics of pelagic ecosystems has not received the same attention,
despite the fact that these systems contribute substantially to total
primary production, biogeochemical cycling and global fishery yields (Pauly
& Christensen 1995). The lack of information on pelagic food webs is of
particular concern since large predatory fishes within these ecosystems
have experienced substantial declines over the past few decades, thus
altering food web structure and the relative impact of topdown controls
(Jackson et al. 2001, Watson & Pauly 2001, Meyers & Worm 2003). As a
result, there is a clear need to investigate pelagic food webs and this
information is prerequisite for maintaining biodiversity and fishery
yields.
Apart from floating Sargassum spp. (hereafter Sargassum), the pelagic
zone of the Atlantic Ocean and the Gulf of Mexico is characterized by
lack of structure and low levels of primary production. Sargassum, a
brown macroalgae (Phaeophyceae) comprised of 2 species (S. natans and S.
fluitans), is a ubiquitous surface feature in this region. Sargassum
often accumulate in large mats or windrows, thereby forming a structured
habitat for pelagic fauna, and survey work indicates that these floating
mats represent a critical habitat for several members of the pelagic
community, including a variety of invertebrates, fishes and sea turtles.
Moreover, several recreationally and commercially important finfish use
Sargassum mats as refuge during early life, and it is likely that the
structural complexity afforded by floating Sargassum reduces
predation-mediated mortality. If this assumption is valid, survival and
recruitment success of certain pelagic fishes will be linked to the
distribution and abundance of Sargassum.
Understanding the trophic structure of Sargassum communities requires a
detailed understanding of the feeding histories of associated fauna. In
recent years, stable isotopes and fatty acids have been used extensively
to investigate marine food web structure, since consumer tissues reflect
the isotopic and fatty acid composition of prey in a predictable. These
natural biomarkers provide time integrated or long term measures of
diet, and both approaches afford information on source(s) of organic
matter supporting local food webs as well as trophic relationships of
associated consumers. In a recent study, we used both stable isotope and
fatty acid signatures to identify the source(s) of organic matter
supporting pelagic fishes in mid-shelf waters of the Gulf of Mexico. In
addition, these natural dietary markers were used to delineate pathways
of energy flow through the Sargassum complex from autotrophs to apex
predators, with a species emphasis on fishes and their presumed prey
(e.g. crabs, shrimps). The goals of this work were to enhance our
understanding of food web dynamics within this prominent yet poorly
understood component of the mid-shelf shelf ecosystem, and to determine
whether Sargassum is an important source of energy for pelagic fishes.
Synopsis of results to date: Stable carbon isotope ratios (d13C) of four autotrophs (Cladophora sp., phytoplankton [based on POM],
Sargassum
fluitans, Sargassum natans) were distinct (range:-16.3 to -21.0 ), with
S. fluitans and S. natans enriched by 2-5 relative to Cladophora and
POM. Stable nitrogen isotope ratios (d15N) of both S. fluitans and S.
natans were depleted by 5 7 compared to Cladophora and POM. The
majority of d13C values of consumers were between -16 and -18 , and
d13C values were most depleted for juvenile shrimps, juvenile crabs, and
certain juvenile fishes. Stable carbon isotope ratios of adult fishes
varied from -16.1 to -17.5 . Enrichment of δ15N occurred with
increasing trophic position and the lowest values were observed for
juvenile crustaceans, which ranged from 6.0 to 8.7 . The majority of
juvenile fishes were secondary heterotrophs (δ15N values ca. 8.0 to 11.0
), while most adult fishes were tertiary consumers with δ15N values
ranging from 11.9 to 14.3 . Carbon source estimates from the two-source
mixing model indicated that ~ 80 % of organic matter supplied to
consumers (pooled across taxa) in the Sargassum complex was derived from
POM. Fatty acid signatures of the primary producers were significantly
different and used to further evaluate organic matter contribution to
Sargassum-associated consumers. C22 polyunsaturated fatty acids (PUFAs)
(22:6n-3, 22:5n-3) were most abundant in POM, while high levels of C18
and C20 PUFAs were observed for Cladophora and Sargassum (18:2n-6 and
20:4n-6, respectively). Consumer signatures were dominated by 22:6n-3.

Stable carbon and nitrogen isotope ratios ( mean ±1 SE) of producers and consumers associated with the Sargassum complex in
the northwestern Gulf of Mexico Boxes with dashed lines are used to represent the stable isotope ratios of producers
and arrows denote the expected trajectory of enrichment with increasing trophic position.
Lower and upper case letters were used to denote invertebrates and fishes, respectively.

click graphic to enlarge
Percent composition of fatty acids within autotrophs and trophic levels (TL) 1.0-4.0.
A suite of invertebrates and fishes were included in each trophic level category: TL 1.0
(Balistes capriscus, Latreutes fucorum, Leander tenuicornis), TL 2.0 (Acanthocybium solandri,
Caranx crysos,
Histrio histrio, Monocanthus hispidus, Portunus sayi), TL 3.0 (Coryphaena hippurus,
Kyphosus saxatilis,
Makaira nigricans, Seriola dumerili, Thunnus atlanticus,
Thunnus albacares), TL 4.0 (Euthynnus alletteratus,
Scomberomorus cavalla). Mean values are reported for grouped saturated, monounsaturated, 5 abundant
polyunsaturated fatty acids (PUFAs) 18:2n-6, 20:4n-6, 20:5n-3, 22:5n-3, 22:6n-3, and all other PUFAs.
Sample size (N) denoted for each category.
Further Reading
Turner JP, Rooker JR (2006) Fatty acid composition of flora and fauna
associated with Sargassum mats in the Gulf of Mexico. Marine Biology
149: 1025-1036
Rooker JR, Turner JP, Holt SA (2006) Trophic ecology of Sargassum-associated
fishes in the Gulf of Mexico determined from stable isotope and fatty
acid analysis. Marine Ecology Progress Series 313: 249-259
Wells RJD, Rooker JR (2004) Distribution, age, and growth of
young-of-the year greater amberjack, Seriola dumerili, associated with
pelagic Sargassum. Fishery Bulletin 102:545-554
Wells RJD, Rooker JR (2004) Spatial and temporal habitat use by fishes
associated with Sargassum mats in the NW Gulf of Mexico. Bulletin of
Marine Science 74: 81-99
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Dr. Jay R. Rooker · Department of Marine Biology
Texas A&M University @ Galveston
5007 Ave U, Galveston, Texas 77551
rookerj@tamug.edu · 409-740-4744
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